Savory Cottage Cheese Muffins are one of my favourites for an afternoon snack or breakfast. Made with chickpea flour, ground almonds, cheese, and broccoli, these gluten-free muffins are packed with protein to keep you satisfied. Freezer-friendly and perfect for meal prep.
Cottage cheese muffins like woah
Today, we're making savory, high-protein egg and cottage cheese muffins. Imagine if a frittata and a gluten-free muffin had a dense, cheesy, broccoli-studded baby, and that's what we have here. They're so good.
Why I love these:
- These babies are packed with protein from no less than five different sources. We're talking eggs, chickpea flour, almond flour, cottage cheese, and sharp cheddar.
- They are so, so satisfying (see above), which means no more getting hangry 15 minutes after eating a muffin.
- They're the perfect vegetarian breakfast, snack, or whatever your heart desires.
And! They just so happen to be gluten-free, grain-free, and completely delicious. And with broccoli on board, too? I am one happy nutrition lady.
If you're not a fan of the texture of cottage cheese, no need to stress. It kinda melts right into the muffin, no lumpy bits in sight. You could, of course, call cottage cheese's more sophisticated European cousin into action and make these Whole Wheat Ricotta Muffins instead. If you're keen on a sweeter muffin, give our honey-sweetened Blueberry Cottage Cheese Muffins a try.
Featured comment:
OMG. Your recipes never disappoint! I was initially skeptical of broccoli in my baking but my wise husband said “trust her recipe, they’ve always been great” and they are!!
~ Sylvie ⭐️⭐️⭐️⭐️⭐️
Let's make Savory Cottage Cheese Muffins!
Alrighty, friends, I'm going to talk you through the process step by step. No need to take notes—there's a printable recipe card at the bottom of this post.
Step 1: Prepare
Start by pre-heating your oven and lining your muffin tins. Remember, parchment or silicon muffin liners are absolutely essential for this recipe!
Combine the eggs, cottage cheese, and milk, and whisk, whisk, whisk! Then add the almond flour, chickpea flour, baking powder, salt, and pepper and give it a good stir.
Step 2: Add your chunky bits
Add the chopped broccoli and ½ cup of cheddar cheese to the bowl. Stir it up!
Step 3: bake your muffins
Spoon the cottage cheese muffin mixture into the lined muffin tins. Sprinkle the tops of the muffins with the remaining cheddar cheese and bake those babies for 25-30 minutes, until the muffins are puffed and golden.
Note! Use parchment paper: You must, must, MUST use either parchment muffin liners or silicon muffin cups. This is non-negotiable. As a last resort you can cut squares out of regular parchment paper (as I have done here) and use those to line the tins.
Looking for more nutritionist-crafted recipes with cottage cheese? Try our signature blueberry cheesecake cottage cheese smoothie, this kale lasagna with cottage cheese (my personal favorite!) or our high-protein marry me pasta with cottage cheese.
Egg and Cottage Cheese Muffins with Chickpea Flour
Equipment
Ingredients
- 1 cup cottage cheese preferably full fat
- 4 large eggs
- ¼ cup chickpea flour
- 1 ½ cups almond flour or 1 cup / 150g whole almonds ground to a fine powder
- 1 teaspoon baking powder
- ¼ cup milk
- ¾ cup grated cheddar cheese divided
- 1 cup finely chopped broccoli florets from lightly steamed broccoli
Instructions
- Heat your oven to 200°C / 400°F.
- Line 9 muffin tins with parchment muffin liners, or squares of parchment paper.
- If you don't already have steamed broccoli on hand, start by lightly steaming some broccoli florets and stems. Rinse in cold water, squeeze out the moisture with a clean kitchen towel, and finely chop the broccoli. You should have 1 cup of chopped broccoli for this recipe.
- In a large bowl, whisk together cottage cheese, eggs, and milk.1 cup cottage cheese, 4 large eggs, ¼ cup milk
- Add chickpea flour, almond meal, and baking power and mix well.¼ cup chickpea flour, 1 ½ cups almond flour, 1 teaspoon baking powder
- Now add ½ cup of grated cheddar cheese, and your chopped steamed broccoli florets.¾ cup grated cheddar cheese, 1 cup finely chopped broccoli florets
- Spoon into 9 prepared muffin cups. Sprinkle the tops the muffins with remaining ¼ cup of cheese.
- Place in the oven and bake for 25 - 30 minutes, until the tops are golden and puffy. Remove from the oven and cool on a wire rack.
Notes
- Nutrition values are an estimate only.
- Parchment muffin liners or silicon muffin cups are essential for this recipe.
- Chickpea flour can be replaced with another bean flour or all-purpose flour if desired.
- Almond flour can be made by grinding 1 cup whole almonds in a food processor.
- Muffins can be frozen once completely cooled and stored for up to 3 months.
Nutrition
A note about flour
Chickpea flour: If you don't have chickpea flour on hand, you can substitute another high-protein flour, such as soybean flour. Since only a small amount of this flour is used in the recipe, it's also perfectly fine to replace it with all-purpose flour if you prefer. If you *do* buy a bag of chickpea flour just for this recipe, I make these Chickpea Fries to use it up!
Almond flour: The almond flour is pretty essential for this recipe. If you don't have almond flour handy, you can also just whizz up one cup (about 150g / 5.5oz) of whole almonds in your food processor to make a fine powder.
If you make your own homemade almond milk, this recipe is great for using up the almond meal! Just make sure it's dried out before you use it to make these muffins.
Robin says
These are amazing! A whole meal in a muffin. I made a big batch and gave some to my friend and she still talks about them a year later.
Rhonda says
These muffins are a tasty protein hit after gym. I used gluten free flour, sauted chopped onion and bacon, then chopped spinach to finish, then added with grated carrot for the veg hit. Topped with pumpkin seeds and parmesan.
Katie Trant says
Hey Rhonda! These sound like great additions to the muffins. So glad you enjoyed them!
Nelly says
I really enjoyed the muffins.
I didn’t have any broccoli however I added some chopped green onions, some smoked paprika and it worked out well. Very taste and I’ll be making them again. Thanks!
Katie Trant says
Hey Nelly! Green onions would be delish in here! I've also used cubes of roasted squash before and it has turned out great.
Heids says
Followed recipe to the letter...very strong broccoli flavour and unpleasant texture. Sorry 🫤 was really hoping to love them.
Katie Trant says
Bummed they didn't work out for you!
Emily says
I will preface that I made a lot of additions to this recipe. I think this recipe is a great base. I used all chickpea flour since I didn’t have almond flour and it came out fine. However I noticed there was no salt, pepper, or seasoning to this. I ended up adding in some chicken bouillon, smoked paprika, pepper, hot sauce, garlic and onion. I streamed the broccoli in some chicken bouillon as well.
I think without any seasoning, especially salt, this would be a pretty bland recipe. But it was a nice recipe for using up my blended cottage cheese that wasn’t just “cottage cheese bowl with raspberries!”
yasmine ogando says
Can I sub the chickpea flour for coconut flour or any other flour?
Katie Trant says
Hey Yasmine! I have tested this recipe with chickpea flour, soybean flour, and all-purpose flour. All three of those work just fine. I'm not sure how coconut flour would work out as I haven't tested it, but it would reduce the protein content in these muffins by just a little bit.
:) says
I used coconut flour in place of the chickpea flour, and they turned out great. There was a hint of coconut flavor. My children didn’t even notice the coconut flavor tho.
Katie Trant says
Coconut flour sounds like a great sub! Thanks for letting us know how it turned out 🙂
Sylvie R says
OMG. Your recipes never disappoint! I was initially skeptical of broccoli in my baking but my wise husband said “trust her recipe, they’ve always been great” and they are!!
It’s always impressive to me how your recipes manage to be easy to make, delish and each thing is almost a full meal. Thanks again from my family!
Katie Trant says
Aww, thank you so much. And thanks to your husband for the trust! I love these savory muffins with broccoli, so I' glad you tried them!
KO says
Stumbled across this recipe looking to use up cottage cheese! Delightful, will make again! Followed recipe exactly - would add a bit of salt next time and spray the parchment liners (they stuck pretty solidly to the paper). I think would be good served with a little sprinkle of crushed red pepper. Thanks!
Katie Trant says
Hey KO, so glad you enjoyed these as much as we do! I'm surprised they stuck to the parchment, but I guess all brands are not created equal. Crushed red pepper sounds great!
ra says
Hi Katie! Do you think I could do oat flour instead of the almond flour?
Katie Trant says
Hi Ra, oat flour and almond flour have very different consistencies. Oat flour tends to be quite thirsty and sucks up a lot of moisture from a recipe, whereas almond flour is fatty and is not absorbent. So while you can certainly try this recipe with oat flour, I have not tested this modification and I can't say how it will turn out. My guess is the muffins would be a bit more gummy in texture.
Pamela says
Shouldn't it real sprinkle the remaining cheese, not cottage cheese on top of the muffins before baking
Katie Trant says
Yes, you have used the entire amount of cottage cheese earlier in the recipe, so it is the remaining shredded cheese. This is specified in the insructions.
Martha says
Actually, Step 6 says to sprinkle the remaining cottage cheese - which is confusing.
"Step 6: Sprinkle the tops of the muffins with the remaining cottage cheese. "
Katie Trant says
Aha, I had to comb through the post to see what you were looking at. I was looking at the recipe card, where the ingredients and instructions are laid out. In that case the instructions were correct and step six was something completely different, so I was confused. I see how that you've spotted an error in the body of the post, which has been corrected. Keen eyes!
Chiara says
Finally a real good savoury muffin recipe, and with tons of proteins, no less! Thank you so much for sharing. My husband hates broccoli (yeah, I don't know how our marriage is still going) so I used bacon, spinach and sundried tomatoes instead. Delish!
Katie Trant says
Yay! So glad you enjoyed this as much as we do, Chiara. And regarding your husband, I feel your pain. My husband hates pancakes... I just don't know.
Abigail says
So I nearly set my oven on fire making these yesterday (not the recipes fault)! We didn't have any parchment paper and I wanted to make sure I listened to your advice about lining the muffin tins, so I thought "Wax paper is basically parchment paper. I'll use that!" I'm sure you are already groaning, as the two can definitely NOT be substituted when baking at high temperatures, a fact I only just learned. Fortunately I noticed after only a minute or two that the oven was filled with smoke, and my dad helped me rescue the batter, transferring it to a different muffin pan.
Despite the near disaster, the muffins were delicious! I will definitely be making them again.
Katie Trant says
Haha oh dear. Yeah... parchment and wax paper are NOT the same.
Frances says
These are a favorite muffin, can't believe it took me so long to try them. Finally got some almond flour which I have not used much before. I think the higher calorie count on it stopped me from using it or making recipes that used it, but I have now changed my mind on that! I had to improvise a bit as I didn't have quite enough cottage cheese left so I took a gamble and used a bit of nonfat greek yogurt ( Fage, which is a thicker one,)and made up the difference. (60 grams worth) I also added only a bit over 1/4 cup shredded cheese total-(that was just to keep calories down for me,) and used white whole wheat flour instead of the chick pea flour, ( may get some for next batch) plus made smaller so- 12 of them with parchment type papers. ( Hopeful portion control!) They look beautiful and tasted amazing. I don't think I will ever be without them in my freezer.
Maggie says
Best ever! Love them. Perfect freezer backup snacks.
Switched broccoli for zucchini to make daughter happier so I added parmigiano for a bit more kick.
Also tried loaf version when I was feeling lazy. It was perfect for picnic/summer salad dinner, warm or cold.
One of my fav recipes on your blog.
Sheri says
Did not like the flavor of the chick pea flour. Might have liked them with regular flour.
Janet says
Oh my goodness! How seriously good are these muffins? I made these today and they have all gone!!! Best savoury muffin ever. I am new to this website, but am liking what I have found - thank you, Katie for all the advice on nutrition and the lovely recipes.
Katie Trant says
Yay, so glad you enjoyed them so much!
Nava Morris says
I had to sub chickpea flour with almost 1/4c whole wheat flour, and cheddar cheese with mozzarella. I added onion powder, garlic powder, Trader Joe's chili lime spice mix, and salt. I also forgot to put in the baking powder. These were delicious!!! It's obviously a very versatile recipe. I hope they'll freeze well even w/out the baking powder. We'll see. Thank you for a great recipe.
Marilee says
These are amazing! They are the perfect, healthy snack. I'm making them for the second time as I type this comment, and the only things I've done differently are add a bit of fresh black pepper and garlic powder, and a pinch of salt. Thank you for this wonderful recipe:)
K T says
Mine did it turn out well. They are stuck to silicone cups. It took More than an hour to bake and still inside was not cooked appropriately. 😞
Katie Trant says
Oh wow. More than an hour? Stuck to silicone? It sounds like something went terribly wrong. Without being there to troubleshoot it with you, I'm afraid I'm not much help to sort it out, but it does seem very unusual that an egg-based recipe would have to cook for that long.
Emelie says
As soon as I saw you post this recipe, I had to make these! Love the idea of a savoury muffin. Why are these not more of a thing?? So many sweet muffins out there and I’m usually not that into muffins generally. They turned out perfectly! Definitely will have these on regular rotation.
Katie Trant says
I know, right?! They're so great for quick breakfasts or snacks, and it's nice to not have something sweet all the time.
Charlotte says
Oh my goodness, these are so good! And just the perfect thing to have as a snack after work so that I can have a jog before dinner. (I didn't make any changes to the recipe)
Katie Trant says
Yay, I'm so glad you like these! They're the perfect pre-workout snack 🙂
Sandra Lea says
These are delicious, I added a little diced red pepper but otherwise followed the recipe exactly. I love the texture and I'm always looking for easy grab and go breakfasts.
Katie Trant says
Love the idea of adding red pepper to these!
Patricia says
Loved these. I added a 1/2 tsp salt and a 1/4 tsp onion powder. I only had 2% cottage cheese, so that's what I used and they were really good. My muffin tins must be smaller because it made 12 muffins for me. I used silicone liners and they came out perfectly. I plan on wrapping and freezing most for quick breakfasts. Thanks for another great recipe.
Lindsay says
Made these this morning with leftover broccoli and cottage cheese my kids have decided to hate all of a sudden. My 4yo had a great time helping me.
Both the 4yo and 10mo are currently devouring them and asking when we can make them again.
Heather Morrison says
Do you think this recipe would work using WW cake and pastry flour instead of the almond and chickpea flour?
Katie Trant says
Nope. That's a completely different recipe.
Andrea says
Believe it or not I was actually planning to comment on the old recipe just before I saw that you had updated it. I've made it so many times over the years for my kids. It's such a fantastic recipe for a high calorie but healthy snack (something I searched high and low for on the internet to help give my underweight toddler a boost). The kids always devour them and I love being able to keep them at the ready in the freezer. I had previously substituted quinoa flour for the soy flour. Look forward to trying this new variation!
Dennis says
This is a great recipe. I might try it with spelt flour, cause I have it, and love it.
themuffinmyth says
I love spelt flour too. It'll change the protein profile a bit, but not too significantly.
Jess says
Do these need to be refrigerated after baking? Not sure because of all the eggs and dairy.
Katie Trant says
Hi Jess! Yes, they definitely need to be kept in the fridge. I actually keep mine in the freezer, and just pull out one or two muffins when I'm in the mood.
Pamela says
Hey Katie,
this is great, i'm going to try it. My bf is a protein buff so he will definitely appreciate this. lol
Instead of the soy flour, do you think wholegrain flour + a scoop of protein OR skim milk powder could do the trick? I know soy flour is good for increasing the protein content without increasing the toughness but if not into the soy flour, do u know of anything else that could work. let me know what you think. or i can try it and let u know how it goes. 🙂
I recently make high protein pancakes with wholegrain flour, protein powder, ricotta cheese, egg, milk, blueberries and chocolate chips. turned out great! although a little on the brown side due to protein content and maillard reactions! (yes 340!!) lol!
they were delish nonetheless!
themuffinmyth says
There isn't that much soy flour in the recipe, so I'm sure if you tried replacing it with all purpose or whole grain flour it wouldn't change the structure all that much. Most of the structure is coming from the eggs in this case anyways since there isn't any gluten in the soy flour. Give it a try and let me know how they turn out! There was a lot of maillard browning in these as well!
heather says
How do you think these would be with pureed squash or pumpkin ( I have bags of it in my freezer)?
themuffinmyth says
I think that would make them really wet. The roasted squash is for adding tasty chunks (and isn't vital to the recipe, you could substitute lots of other chunky bits. Tomatoes? Olives?), pureed squash would drastically increase the moisture content. You could try it, but I'd personally save the puree for something else.